Structure_vis module¶

class Structure_vis.structure_visualiztion(structure=None, structure_file_name=None, structure_file_directory=None, D3_plot=True, label=False)[source]¶

Bases: object

set_relative_radii()[source]¶

set_atomic_symbol()[source]¶

set_label(flag)[source]¶

visualize()[source]¶

set_boundaries(bounds=([0, 1], [0, 1], [0, 1]))[source]¶

color_atom(atom)[source]¶

choose_atoms_by_coordinates(coordinates)[source]¶

choose_atoms_by_index(indice)[source]¶

Structure_vis.find_element_in_matrix(element, matrix)[source]¶